Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927250.1_cds_XP_016475122.1_67081
CDS Infomation

[gene=LOC107796815] [db_xref=GeneID:107796815] [protein=B3 domain-containing transcription factor VRN1-like] [protein_id=XP_016475122.1] [location=complement(join(5925..6176,6309..6692,6798..6976,7088..7622))] [gbkey=CDS]
Sequence

ATGTATTGCCAATTATACAGATCTGCCACTGTCTTGATTCAGAGATGTATGAAACTGAGT
GCATATTTCCTTTCCGCGCAGAGGATTCCAGAAGACTTTGCGAGCAGATATTGCAAGAAC
ATGCTTAACCCTGTGTATCTTGAGGTTCCCAGTGGAGAAGTATGGGAGGTTGAAGTTGTT
CATTCTGAAGGCCAAATTTGTCTAGGCATTGGATGGCAAGATTTCAGTGACTTCTATTCA
ATAAGCTGCGGCCACTTTTTGATGTTCGGATACAATGCTCGTTCCCATTTTAATGTCACT
GTATTTGATTTGAGTGCGTCAGAAATTGAATATCCAACAAAAGAGATTGAGTCGGATGAT
TCCATAGATATTTCGGATGTGGTTGAGCACTCTGTTGAAAATCTGAGCCATGGTCCCTTA
GGCCAGGAGAGAAAAAGAAAAAGACAAGAAAGGGAATCAGAGGATGATATTCCAGTTAAC
GTTCAAACTAAAGTAATCGAGGAAGAAGAGTCTCAAGGAAATGTAGTTTCACTAGAAAGA
AGCGAAGGCTGTAGGGAGCAGGAGCAACAATCCAACATTATTACCAGTAAGAGCGACACA
GAGAGGGACGAAGAGAGAGCTGAAAACTACCAAAGAGCAAAAGCTTTTAAATCTAAGAAC
CCATTCATTATATCTTTTATGCATCCATCTTATGTCACGAGACCACACAATCTGTCCATA
CCGTTGAAATTTGCTCGGAAGTATTTCATGCAGAACCGTGGCAAGTTAGTGCTTCGTGTT
CCAGGAAGTGGATTTTGGACTGTCAAATGCACTTTACGAACGGGAAATGCTAAAATTACT
TGTGGATGGAAGGCATTCGTGCTGGACAATAAGTTAAAATCTGGTGATGTTTGTGTCCTC
GAAGTGATTAAAGACACTAAGCTCTTATTGATAGATGTCACCATATTTCGAGGGGTTTCT
GATAGTACAAACGAGTCTATCAACCCTGAGCCTTCAGTTCCATGTTCTCCAGCCTATCAA
AGAGCAAAAGCTTTTACATCTGAAAATCCATTCTTCATATATCCTATGCAGCCATCATAT
GTTTCTGGCCCTTCATTGACCATATCACGGGTGATTGCTAGTAAATTTTTCCCCACTAGA
TATAGCGATGTGGTGCTTCAAGTTCCAAACAAGAGATCATGGGCTTTGAATTGCACTGTT
GGAACAAAAAATGGTAGGTTGAATTCAGGTTGGAAGAAGTTTGTGCAGGACAATAGCATA
AAAATAGGTGATGTTTGTGTCTTCGAACAGGTTAGTAGAACCAAACTTTTATTCAATGTC
TACATATTTCCTGCAGTCGAAGGTGTGTGA

Peptide Sequence

PEP ID

XP_016475122.1
PEP Infomation

PREDICTED: B3 domain-containing transcription factor VRN1-like [Nicotiana tabacum]
Sequence

MYCQLYRSATVLIQRCMKLSAYFLSAQRIPEDFASRYCKNMLNPVYLEVPSGEVWEVEVV
HSEGQICLGIGWQDFSDFYSISCGHFLMFGYNARSHFNVTVFDLSASEIEYPTKEIESDD
SIDISDVVEHSVENLSHGPLGQERKRKRQERESEDDIPVNVQTKVIEEEESQGNVVSLER
SEGCREQEQQSNIITSKSDTERDEERAENYQRAKAFKSKNPFIISFMHPSYVTRPHNLSI
PLKFARKYFMQNRGKLVLRVPGSGFWTVKCTLRTGNAKITCGWKAFVLDNKLKSGDVCVL
EVIKDTKLLLIDVTIFRGVSDSTNESINPEPSVPCSPAYQRAKAFTSENPFFIYPMQPSY
VSGPSLTISRVIASKFFPTRYSDVVLQVPNKRSWALNCTVGTKNGRLNSGWKKFVQDNSI
KIGDVCVFEQVSRTKLLFNVYIFPAVEGV

Transcript Sequence

Gene sequence data has not been registered.